Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015792540.1_cds_XP_016512750.1_2457
CDS Infomation

[gene=LOC107829795] [db_xref=GeneID:107829795] [protein=glutamate--tRNA ligase, cytoplasmic-like] [protein_id=XP_016512750.1] [location=join(1439..1575,2681..2777,2949..3102,7347..8470,8891..9358,10581..10826)] [gbkey=CDS]
Sequence

ATGGAGCTGAAGCTAGCATTCCCCGCGGATACTCCGCCTTTGGCTGTTATTGCGGCGGCG
AAGATTGCCGGAGTTCCACTCTCTACTGATCCAACTCTTTCTCCTGGTTCTCCTCCTATT
ATCCTTCTCCCTAATGGATTGAAGCTGCAGGGAACTTCTGTGCTTCTAAGGTACATTAGT
CGGGTTGCAAACATTCCTGATTTATACCAGCGAGACGCCTTTGAGTCTTGTCAGATAGAT
GAATGGCTAGAGTATGCTCCTATTTTTGCTTCTGGCCCTCAATTTGAGGAAGCATGTGGC
TATGTTGATGGATATCTTCTGCAGTGCACATTTCTTGTTGGACATATCCTCTCAATTGCG
GATATTGCAGTTTGGTCTAGCCTTGCAGGTACTGGAAAGAGATGGGAAAGCCTAAGATCT
TCTAAGAAGTACCAAAATCTGGCAAGGTGGTTCAACTCAATATTAGCTGAATATGATGGT
GTTCTAAATGAAGTCACAGCAACATATATGGGAAAGAAAGGCTCGGGAAAGCCAACTGTA
TCTAAAGTGAAAGAGCAAGATGGCTCAAATGCTAATTTGGCCAAAGTAAATGGTGATTCC
ACTGACAAGGAAAAATCAGGTAGCAGACCAACATTTGAGGTAGATCTTCCAGAGGCAGAG
GCTGGAAAAGTGCGTTTGAGGTTTGCACCAGAACCTAGTGGTTATCTCCATATTGGTCAC
TCAAAAGCAGCATTACTGAACCAGTATTTTGCTGAAAGATATAAAGGGGAAGTTATTATT
CGTTTCGATGACACGAATCCTGATAAGGAAAGCAATGAATTTGTGGATAATCTACTGAAA
GATATTGAAACTCTAGGAATTAAGTATAGGACTGTGACATATACATCTGATTACTTTCCA
AAATTGATGGAGATGGCTGAGAAATTGATTCGTGAGGGTAAAGCCTATGTGGATGATACA
CCAAGGGAGCAAATGCAAAAAGAAAGAATGGATGGAATTGAATCAAGGTGTAGGAACAAC
AGTGTGGAGGAGAATCTGAAATTATGGAAGGAGATGATTGCTGGCTCAGAGAGGGGAACA
ATGTGTTGTGTTAGAGGGAAATTGGATATGCAGGATCCTAACAAGTCAGTTAGGGACCCA
GTATATTACCGCTGCAATCAGACTCCTCATCACAGGATTGGTGCTAAATATAAAGTATAC
CCTACTTATGATTTTGCATGCCCATTTGTAGATGCTGTTGAGGGTATTACACATGCTCTT
CGATCTAGTGAGTATCATGACAGGAATGACCAGTACTATAGGATTCAAACTGATATGGGT
TTCAGAAAAGTTCATATTTATGAATTTAGTCGGTTGAATTTGGTCTATACACTTCTTAGT
AAGCGCAAGCTGCTGTGGTTTGTGCAAAATGGACTGGTTGAAGGGTGGGATGATCCTCGA
TTTCCGACTGTACAAGGGATAGTGCGCAGAGGGCTGAAGATTGAGGCGCTGATACAGTTC
ATTCTTGAACAAGGAGCATCAAAGAATCTCAATCTAATGGAGTGGGACAAGCTGTGGGCC
ATTAACAAGAAGCTCATTGATCCTGTATGTCCTAGGCATACTGCAGTCATTGAAGAAAGA
CGAGTCCTATTGACTTTGAGTAATGGGCCAGATGATCCTTTTGTACGTATTGTACCCAAG
CATAAAAAATATGCAGGTGCTGGGGAAAAGGCAACAACTTACTCCAAAAGAATCTGGATA
GACTATGATGATGCTGTATCAATCTCTGTCAACGAGGAAGTAACATTGATGGATTGGGGT
AACGCAATAGTGAAAGAGATACAGAAGGACCAAGAGGGTAATGTTACTCATCTGTCTGGG
ATTCTGCACCTTGAAGGGTCAGTTAAAACAACGAAGTTGAAGCTCACTTGGTTGCCAGAG
AGTGATGAGCTTGTTAAACTCTCTTTGGTCGATTTTGACTATTTAATTACAAAAAAGAAG
CTCGAGGAAGATGAGAATTTTGTTGATGTTGTTAATCCTTGCACAAGAAAGGAGACTTCG
GCACTTGGTGATTCCAACATGAGAAACCTGAAGCGTGGAGACGTGTTGCAGCTGGAGAGG
AAGGGCTACTTCAGATGTGATGTTCCTTTCTTAAGACCAACAAAATCAGTTGTTCTTTTT
GCCATCCCAGATGGTAGACAACAACCAGTGTTGCGGTTTGCAGGCTCAGATGGCAAAACA
AAATGA

Peptide Sequence

PEP ID

XP_016512750.1
PEP Infomation

PREDICTED: glutamate--tRNA ligase, cytoplasmic-like [Nicotiana tabacum]
Sequence

MELKLAFPADTPPLAVIAAAKIAGVPLSTDPTLSPGSPPIILLPNGLKLQGTSVLLRYIS
RVANIPDLYQRDAFESCQIDEWLEYAPIFASGPQFEEACGYVDGYLLQCTFLVGHILSIA
DIAVWSSLAGTGKRWESLRSSKKYQNLARWFNSILAEYDGVLNEVTATYMGKKGSGKPTV
SKVKEQDGSNANLAKVNGDSTDKEKSGSRPTFEVDLPEAEAGKVRLRFAPEPSGYLHIGH
SKAALLNQYFAERYKGEVIIRFDDTNPDKESNEFVDNLLKDIETLGIKYRTVTYTSDYFP
KLMEMAEKLIREGKAYVDDTPREQMQKERMDGIESRCRNNSVEENLKLWKEMIAGSERGT
MCCVRGKLDMQDPNKSVRDPVYYRCNQTPHHRIGAKYKVYPTYDFACPFVDAVEGITHAL
RSSEYHDRNDQYYRIQTDMGFRKVHIYEFSRLNLVYTLLSKRKLLWFVQNGLVEGWDDPR
FPTVQGIVRRGLKIEALIQFILEQGASKNLNLMEWDKLWAINKKLIDPVCPRHTAVIEER
RVLLTLSNGPDDPFVRIVPKHKKYAGAGEKATTYSKRIWIDYDDAVSISVNEEVTLMDWG
NAIVKEIQKDQEGNVTHLSGILHLEGSVKTTKLKLTWLPESDELVKLSLVDFDYLITKKK
LEEDENFVDVVNPCTRKETSALGDSNMRNLKRGDVLQLERKGYFRCDVPFLRPTKSVVLF
AIPDGRQQPVLRFAGSDGKTK

Transcript Sequence

Gene sequence data has not been registered.